Updates in the 5/11/09 vers. (over the 1/26/09 vers) of KalmanEM.R
* The main KalmanEM() function will output AIC and AICc.
* Bugs in B estimation were fixed.
* Fixed B matrices are allowed.
Updates in the 1/26/09 vers. (over the 8/6/08 vers) of KalmanEM.R
* Groups can now be given names instead of just numbers. So whichPop=c("north","south","north","north") for example instead of c(1,2,1,1). Column and row names will use the text labels.
* A bug relating to N=1 (logN=0) values was fixed.
* Bootstrap functions were added for model selection (AICb) and bootstrap CIs. No documentation yet, but the code is commented.
* A bug that prevented the code from being used for certain univariate time series was fixed.
* Fixed a bug with the MCInit=T (which allows searching of the initial conditions space). Due to this bug, MCInit=T did not work properly find the maximum likelihood in some cases in the 8.6.09 version (although it would act like it did).